Browse of TCMCG022C30345 protein

CDS

Accession Number	TCMCG022C30345
gbkey	CDS
Protein Id	XP_039159698.1
Location	complement(join(22582702..22583306,22584341..22584712,22585054..22586140,22586337..22586632,22587458..22587536,22587860..22587947,22588743..22588887,22589064..22589367,22590389..22591723,22592223..22592486,22593202..22593415,22594825..22594884,22595254..22595562,22595666..22595744,22598806..22598885,22598968..22599045,22599202..22599282,22599417..22599504,22599750..22599836,22600570..22600709,22600837..22600910,22602921..22602944))
Gene	LOC104422286
GeneID	104422286
Organism	Eucalyptus grandis

Protein

Length	1962aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA698663
db_source	XM_039303764.1
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X2 [Eucalyptus grandis]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAACGTCTTCAAACTGGTTGGTCTCCATCAAATATCCTGGTTCCAGTTTCTGCCTCTTGAATCAGATTTAAACCCTTTACCGGACAGAAGTGTCAAGTCAGAGACAAAGGATTCTGCTACTTTCTTGGTTCTTTCATCTCATCTTCAGTTGCAGAAGAAAAACTTTCTTAGCACATGGACTAATTCATTTGTGGGACCCTGGGACCCATCTCAGGGTTTGCACAATCCAGATGAAAAAATCAAGCTCTGGCTTTTCCTTCCTGGGCGCCACTTATCTGTTGTTGAGACTGCACAAGCAGCGGTATCTGGACTAAGAGTTGTTGCATCTGGACTATGGTTGGCTCCTGGGGACTCGGAAGAGGTTGCAGCAGCTCTGTCTCAAGCTTTACGGAATTGTATAGAGAGGGCACTAAGTGGACTTTCTTACATGAGATATGGAGATGTATTTTCAAAGTACAATCCATTTCAGAGTGAAGGAATTTTCAGGAGAGGTCAACCAACTGTAGAATTTGTCTTTGCCGCCACAGAAGAGGCGATATTTATACATGCAATAGTTTCAGCAAAGCATATACGTGCCCTTTCAAGCGATGACTTAGAGAGAGCATTAAGGCATGCTTCTCGCAATTCTAGCCATAGACATCCAGTGATTGTATCTCCTAATGGCATGCGCGGAAGGCTAATTGGTGGATGTCCAAGTGATCTTGTCAAGGAAGTATACCTCGGCTCTGGCAAGTCGAAGGCCTCAAGTGGGTTAATAGGTTTGCCGTCTCATGTTTCTCAAGGTTTTGTCTGCCAACTGAGGGGACAAGCTTGTTATGCTGAAGTAACTGTTGGCTGCCCAATTACTGAAACTGACAAGGCATTAGCTCAACGCTCAAATACTCTTAGAAGTGAATGCCTTTCTGCAGGAAGATGCGATCAAAAGGTCTCTCAGGATCATTCATCAACTTACGAGAAGACATTTATATACCCAAATGAGGCAGTGCTTGTCCCAGTCCTGAACGCATCTCTTACCAGATCTTCATTGAGAAGATTTTGGCTGCAGAATTGGTTAGGGCCATCACTGATGGGTTCATCTTACTTTATGCATTGTGGACCACAAATGGACACTCTCGAGGATAGCAATGGATTATGCACTCAGAAAAGTTATTATAGTAGTAGCAATAGTAATTCTAGTAGCTTAAGCAGCCTAAGCAGTAGCTCAAGTGAAAGCGACTACAATATGACTTCTGCAGCAGGGGATCTTGAAGCTGATGCAGACTCGTTGATATCTTCTGCTGAATTGCAGAATGACCGCCTGAAAATGGGCACAAAGCGTCCTCGATCAATAATGACAGATATGTATGGTCAAGTGGACGCTGCCGTTCCTATGCAGGAAGCATACAAATCCGATTTTGGATCTTCAGAAGTTAACACTTCAGCAATTACTGGAGTTGCAAATGAGCAGATAGGATCTCACTGGGATTGGGACGACGATGAGAGAGGTGTGGACATGGATATTCAAGCTCTATTATCTGAGTTTGGTGACTTTGGGGACTTCTTCGAAACTGAAGCTTTGCCTTTTGGAGAGCCCCCGGGAACTGCAGAGTCGCAGACTCTTATGTTTTCTGGTTCAGATTTGGTAGTTGGCAGCAGTCCTGTTGGCATGATGGATGTTTCCGAAAGTATGCTTTTGCCTGTTGGTTTTCCATCTTTAGAGGGCTTTAACCCTCCAGCGGTGTCAGAAGAATTTCTCAGCAAAAATCAAGAGATTACCCTGCCATCTGGGCCAATTGTTGACACTCCAGCATCTAATATTGGCGAGTTTGATCATATTATCAAAGCTGAAGCCTTGATGACATTTGCCCAGGAATATGGAGCAGTTGAGGCACCTACTAGTGACTTCTCTTCGTCAATTTTCAAAAACCCATATTTGCCAAAATCTTGTAATGTGGAGAGTGCAAATTCTAGCACTAATAATTATAAGTATGGTGCTACACCTCCATCTTCTCCTTGTCTGGATGGATCAGATGAGAAGAATGGTGTGGCTTTGACCTCAAAAACGTATCAGGGGAATGATGCTCGGTTAAAGAATTATTACACTCATGTGGAGGCTGGTAAAGTAAAAGATGGGACATTGTCTAAATGTAACGATAGTAGTGCTATTTCTATGGAGGCTGCTCCATCTTCAGTCTCATTCTCTAATGTAGGTCCTGCAAATGTTGTAAAGCCTGGCCAGAAGAAAGTGATTGAAGGTGCCATGGACCATTTAGTTCTTTCTATGAAGACTGTGCTTGCAACAGAAGTGGAGTGCCTTGCATTCCAAGCATCCATGTGCAAGATACGTCATACATTATTATCTTCCACTGTCCAGGCCCCAGTTACTTCAAGCAGGTTAAGTGGGAGTGCTATTTTAAATCATCTGCCTGGTGATCAAAGCACAATGACAGATAACATATCTAGCATGTTCGATGTGAAAAAGAAAGAAACTATACCTGTCAGAATAGCTGGTGATGTTGATGGAGGACTATTAGATGGAAACCTTAATGCTTCTGTACGTGTTTGGCGCACTGTTGGAGTACCTAAAGTTCCAAAAGCCAGTAGTTCACCCGGTATTGAAGTATGTCCATCCCCACTTAACTCATTTAGTGAGGAAGGTGGGCTCTCTTATGGGCAAAGGCAACCACTTCAGGAGCTTCTAGATGGAATGCAATTTCTTGTCCAGCAAGCTACTTCCTTTGTTGATGTGACTTTGGATGCAGACTGCGGTGATGGGCCTTATGGTTGGCTTGCATTGGAAGAGCAATGGCGGCGTGGGTTTTCTTGTGGCCCTTCTATGGTTCATGCAGGTTGTGGAGGGACTTTAGCCTCCTGTCATGCCCTGGACGTTGCTGGTGTGGAGTTAGTAGATCCACTTTCTGCAGACGTGGCATCTGTGATTAGCTTGCTACAGTCAGATATAAAATCAGCCTTAAAAGCTGCATTTGGTAATTTGGATGGTCCTTTATCCGTCACTGAGTGGTGCAAGGGACGCAACCAGCTAGGTGACGTTGGAAACATGGCAGATGGATTTTCGGCAGAGTCCACTGTAGGTGAGTGTAGAGATCCTTCAAATACTCCAACATTTTCAGGTGGAGAAGCATCAAGCCCATCCCAATCCACTGCAGTTGGTTCATCCAATATAAGAGGTAATGGAAAGCTAGACAAGACAGAAGTTGCAATTCGATTAGTTACTAGTGGCCTGGATGGATCTAAACTGGATGAATCGTTCCAAAGGAGATTAAGCCAAGATAACAGTTCAGAGTCTGGACAGCAGTTCTCCTCCCGGCTAAGGCCCACACTTTATGTCCTTCCTTTACCTGCGATACTTGTTGGGTATCAGGACGATTGGCTTAAAACATCGGCTGGCTCTCTACAAGTATGGGAGAAGGCTCCTCTTGAACCTTATGCACTCGCAAAACCTGTCAGTTACTATGTTCTATGCCCAAACATTGATCCCTTAACTTCTGCTGCTACTGATTTTTTCCAACAACTTGGTACTGTTTATGAGACTTGCAAACTGGGGACTCATCTACCCCAGACTATGGGAAACCAAATGGAGACTGATTCTGGAAAAGCATCAACTTCTGGTTTTGTCCTTCTGGATTGCCCTCAGTCAATGAAAATGGTCGGCAGTAATGCATCTCTTGTGGGATCAATGAGCGATTTCTTTCTGTCCCTATCCAATGGCTGGGACTTGACAAGCTATCTCAAGTCTCTGTCAAAGGCTCTCAAAGGATTGAAATATGTTCCATGTTCAACTACAAACCCTAAAGAAGGAAATAGCAGTTCTTGTTTGGTGATCTATGTAGTTTGCCCCTTCCCTGAGCCAAATGCTGTTCTAAAAACAGTGATTGAGTCTTCTGTCGCAATGGGATCAGTCATTCTCCCAGCAGAGAGACGAGGGACATTGAGCAATCAGGTTGGAAAGGCAATGAGCTGCTCGGCAGCTGTCGATGAAGCATCAACAACAAATATCTTGGTGCTTTCAGGATTTAGTATTTCAAAAATAGTGCTGCACATTGTGACAGTTGATGCCATATTTAGGGTAACCAGTCCAACTCTCAGTGAGCTTACCATCCTTAAGGAGACTGCTTTTACTGTCTATAACAAAGCTCGACGGATTTCACGAGGATCTTGTGATGTTCAGTCCTCATCACTTTCAGGTAGATCCCAGTTGGCCATGACCCAAATGACCTCTTCCATGTCTCCTATGTGGAAAGAGTGTGTTGGTCCTCGAATTTCAGGGCCATCCCTTACCAGAGAGGGTGAAATGGATGCCAGCTTGAGGACTGCTGCGTGGGATAATTCATGGCAAACGAGGACTGCGGGACTAAGTAGCGATACTAGTAGAGCTGGGGATTTTCTCTCGCAAGAGGAAGCACGTTGTATGTTTGAACCTCTTTTTATATTGGCCGAACCTGGTTCTCTAGAACATGGTGTTTCACCTACGTTTTCTGCTAGTTTAGTTAACGAATTGTCAAAAGGACAATCAGATGATGGTGGTGGAGGCTTCATGCAAAGTGCGAGCTCAGTGCGAAGTGCAGATTCTGCATCTAGCTCACCAGTCGACGGATCTGAGTCAGACAGCTATGGGTCTGGCCATAAAAAGTTACCAACCATACATTGTTGCTATGGATGGACAGAGGATTGGCGTTGGTTGGTATGCATATGGACAGATGCTCGGGGGGAATTACTTGACAGCCATATATTTCCCTTTGGTGGAATTAGTAGTCGGCAGGACACAAAGGGGTTGCAGTGTCTATTTGCACAAGTTCTACACCAGGGCTGTCAAATTCTTCAGATCTGTTCAGATAATGCTGCTGTCAAGCCCAGAGATTTTGTGATTACCCGCATTGGAAGTTTCTATGAACTTGAATACCTAGAGTGGCAAAAAGCCATTTATTCAGTTGGAGGAGCTGAGATGAAGAGTTGGACACTGCAACTACGGCGATCATTGAGTGAGGGGATGTCCGTGGGAGCCAACGGGGCTTCCTTGCAACAACAGGAGATGAATTTGATTCAAGAGAGACCCCTGCCTTCCTCACCCAGTCCATTGTACAGTCCTCACTCCAAAACCTCAGGCTATATGAAGGGTGGTTTAGGACCTTCAACTGCTAGAAAGCAGGTCATGGGTGGACATGCAGGGGTTGAAAGCCCAAGGGGTCTGCTTCAGTGGGTTCAGACCATCAGCTTTGTTACTGTTTCTGTCGATCATTCCTTGAATTTGGTTTATCCTGTGGATGTTCCATCTCCCGGAGGAGCTCAAAGTGGGAGCACTATGGGTCCATCCGGTTATCTGGAAGGTTTCACACCTGTGAAGTCTCTTGGTTCTACATCCGCATCTTTTCTGCTAATCCCATCACCCAGCATGCGCTTCCTCCCTCCGACACCTCTTCAGCTTCCTACATGTCTCACTGCTGAGTCCCCGCCACTGGCCCACCTCCTTCACAGCAAGGGCGCAGCGCTCCCTCTTTCTACTGCTTTTGTGGCCTCAAAAGCTGTTCCTACCATGAGGAAGGATTTCAGGGGCAACCTAAAGGAAGATTGGCCTAGCGTTCTGTCAGTTGGGCTCATTGATTATTATGGAGGCACTAATGTTAACCAAGACAAAGTCAGCCGAGGCATCACGAAGCAGGGAGGAAGAACTTTGAGCTCAGAAGCCAAGGATCTTGAGGTCGAGATGCATATAGTTCTCGAGTCTATTGCAGCAGAGCTTCAGGCCCTGTCATGGATGACGGTGAGTCCTGCATATATAGATCGAAGGACCGCATTGCCTTTTCACTGTGACATGGTGTTAAGATTGAGAAGGCTTCTTCATTTTGCGGAGAAGGAGCTATCTCGGCAACCAGAAAAATTATAG

Protein:   MWTNVFKLVGLHQISWFQFLPLESDLNPLPDRSVKSETKDSATFLVLSSHLQLQKKNFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHLSVVETAQAAVSGLRVVASGLWLAPGDSEEVAAALSQALRNCIERALSGLSYMRYGDVFSKYNPFQSEGIFRRGQPTVEFVFAATEEAIFIHAIVSAKHIRALSSDDLERALRHASRNSSHRHPVIVSPNGMRGRLIGGCPSDLVKEVYLGSGKSKASSGLIGLPSHVSQGFVCQLRGQACYAEVTVGCPITETDKALAQRSNTLRSECLSAGRCDQKVSQDHSSTYEKTFIYPNEAVLVPVLNASLTRSSLRRFWLQNWLGPSLMGSSYFMHCGPQMDTLEDSNGLCTQKSYYSSSNSNSSSLSSLSSSSSESDYNMTSAAGDLEADADSLISSAELQNDRLKMGTKRPRSIMTDMYGQVDAAVPMQEAYKSDFGSSEVNTSAITGVANEQIGSHWDWDDDERGVDMDIQALLSEFGDFGDFFETEALPFGEPPGTAESQTLMFSGSDLVVGSSPVGMMDVSESMLLPVGFPSLEGFNPPAVSEEFLSKNQEITLPSGPIVDTPASNIGEFDHIIKAEALMTFAQEYGAVEAPTSDFSSSIFKNPYLPKSCNVESANSSTNNYKYGATPPSSPCLDGSDEKNGVALTSKTYQGNDARLKNYYTHVEAGKVKDGTLSKCNDSSAISMEAAPSSVSFSNVGPANVVKPGQKKVIEGAMDHLVLSMKTVLATEVECLAFQASMCKIRHTLLSSTVQAPVTSSRLSGSAILNHLPGDQSTMTDNISSMFDVKKKETIPVRIAGDVDGGLLDGNLNASVRVWRTVGVPKVPKASSSPGIEVCPSPLNSFSEEGGLSYGQRQPLQELLDGMQFLVQQATSFVDVTLDADCGDGPYGWLALEEQWRRGFSCGPSMVHAGCGGTLASCHALDVAGVELVDPLSADVASVISLLQSDIKSALKAAFGNLDGPLSVTEWCKGRNQLGDVGNMADGFSAESTVGECRDPSNTPTFSGGEASSPSQSTAVGSSNIRGNGKLDKTEVAIRLVTSGLDGSKLDESFQRRLSQDNSSESGQQFSSRLRPTLYVLPLPAILVGYQDDWLKTSAGSLQVWEKAPLEPYALAKPVSYYVLCPNIDPLTSAATDFFQQLGTVYETCKLGTHLPQTMGNQMETDSGKASTSGFVLLDCPQSMKMVGSNASLVGSMSDFFLSLSNGWDLTSYLKSLSKALKGLKYVPCSTTNPKEGNSSSCLVIYVVCPFPEPNAVLKTVIESSVAMGSVILPAERRGTLSNQVGKAMSCSAAVDEASTTNILVLSGFSISKIVLHIVTVDAIFRVTSPTLSELTILKETAFTVYNKARRISRGSCDVQSSSLSGRSQLAMTQMTSSMSPMWKECVGPRISGPSLTREGEMDASLRTAAWDNSWQTRTAGLSSDTSRAGDFLSQEEARCMFEPLFILAEPGSLEHGVSPTFSASLVNELSKGQSDDGGGGFMQSASSVRSADSASSSPVDGSESDSYGSGHKKLPTIHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFAQVLHQGCQILQICSDNAAVKPRDFVITRIGSFYELEYLEWQKAIYSVGGAEMKSWTLQLRRSLSEGMSVGANGASLQQQEMNLIQERPLPSSPSPLYSPHSKTSGYMKGGLGPSTARKQVMGGHAGVESPRGLLQWVQTISFVTVSVDHSLNLVYPVDVPSPGGAQSGSTMGPSGYLEGFTPVKSLGSTSASFLLIPSPSMRFLPPTPLQLPTCLTAESPPLAHLLHSKGAALPLSTAFVASKAVPTMRKDFRGNLKEDWPSVLSVGLIDYYGGTNVNQDKVSRGITKQGGRTLSSEAKDLEVEMHIVLESIAAELQALSWMTVSPAYIDRRTALPFHCDMVLRLRRLLHFAEKELSRQPEKL